Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932419.1_cds_XP_016478946.1_70537
CDS Infomation

[gene=LOC107800308] [db_xref=GeneID:107800308] [protein=elongation factor TuA, chloroplastic] [protein_id=XP_016478946.1] [location=complement(27585..29021)] [gbkey=CDS]
Sequence

ATGGCTTCAATTTCAGCAGCCACCGCCACCTCCTCCACTAAGCTTGTATCATCCAACTCC
ACCAATCCTCTTCTTCCTTCCTCCACTAAACCCTCTAAGCTTATCCTATCCTCTTCCTTT
ACCCCTAATTGTTCCACCCTTTTCCTCCACTCACCCGCCACCCCTTCTTCTACTGCCACC
CATCGCCACCGCCGGTTTACTGTCCGCGCTGCCCGTGGCAAATTCGAGCGGAAAAAACCC
CATGTCAACATCGGTACTATTGGCCATGTTGACCACGGAAAGACTACTCTCACCGCTGCT
TTAACCATGGCTCTTGCTTCTATGGGAAACTCCGCCCCTAAGAAATACGACGAAATTGAT
GCCGCCCCAGAAGAGCGTGCTCGTGGTATTACTATTAACACTGCTACTGTTGAGTACGAG
ACTGAGAACCGTCACTACGCCCACGTGGATTGCCCTGGTCACGCTGATTATGTCAAGAAT
ATGATTACCGGTGCTGCCCAAATGGACGGCGCTATTCTTGTTTGTTCAGGTGCTGATGGT
CCCATGCCACAGACTAAGGAACACATTTTGCTTGCTAAGCAAGTAGGTGTCCCCAACATG
GTTGTGTTCTTGAACAAACAAGATCAGGTTGATGATGAGGAGCTGCTTCAGCTTGTTGAG
TTGGAGGTAAGAGAGTTATTGTCAAGTTATGAGTTTCCTGGTGATGATATTCCTATTATT
TCTGGCTCTGCTCTTTTGGCTTTAGAGGCTTTGATGGCTAATCCTAGTATTAAGAGAGGT
GAAAATCAATGGGTTGATAAGATATATGAGTTGATGGACGCTGTTGATAGTTATATTCCT
ATTCCAGTTAGGCAAACTGAATTGCCTTTCTTGATGGCTATTGAAGATGTGTTTTCCATT
ACTGGTAGAGGTACTGTGGCGACGGGGAGGGTAGAGAGAGGGACTGTTAGGATTGGAGAC
ACTGTTGATATTGTAGGTTTGAAGGACACTAGGAGTACTACCGTGACGGGTGTTGAGATG
TTTCAAAAGATTTTGGATGAAGCAATGGCTGGAGACAATGTGGGGTTGTTGTTGAGAGGT
ATTCAAAAGATTGATATTCAGAGAGGAATGGTGTTGGCAAAACCCGGAACAATTACCCCT
CACACCAAGTTTGAAGCTATTGTGTATGTGTTGAAGAAGGAGGAGGGTGGTAGGCATTCC
CCCTTCTTTTCAGGGTACAGGCCTCAGTTTTACATGAGGACTACTGATGTGACCGGAAAG
GTTACTTCCATTACGACTGATAAAGGAGAGGAATCTAAGATGGTCATGCCTGGTGATCGT
GTGAACTTGGTGGTTGAGCTCATTATGCCGGTGGCTTGTGAGCAAGGGATGAGATTTGCC
ATCAGGGAAGGAGGAAAGACTGTTGGAGCTGGTGTCATTCAGAAAATTATCGAGTGA

Peptide Sequence

PEP ID

XP_016478946.1
PEP Infomation

PREDICTED: elongation factor TuA, chloroplastic [Nicotiana tabacum]
Sequence

MASISAATATSSTKLVSSNSTNPLLPSSTKPSKLILSSSFTPNCSTLFLHSPATPSSTAT
HRHRRFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMGNSAPKKYDEID
AAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSGADG
PMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLSSYEFPGDDIPII
SGSALLALEALMANPSIKRGENQWVDKIYELMDAVDSYIPIPVRQTELPFLMAIEDVFSI
TGRGTVATGRVERGTVRIGDTVDIVGLKDTRSTTVTGVEMFQKILDEAMAGDNVGLLLRG
IQKIDIQRGMVLAKPGTITPHTKFEAIVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGK
VTSITTDKGEESKMVMPGDRVNLVVELIMPVACEQGMRFAIREGGKTVGAGVIQKIIE

Transcript Sequence

Gene sequence data has not been registered.